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9 changed files with 88 additions and 409 deletions

2
.gitignore vendored
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@ -1,3 +1 @@
*.pyc *.pyc
dist/
*.egg-info/

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@ -1,5 +0,0 @@
Author:
Darko Poljak <darko.poljak@gmail.com>
Contributors:
matthewi

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@ -10,35 +10,29 @@ Print duplicates
.. code:: python .. code:: python
from sweeper import Sweeper from sweeper import file_dups
swp = Sweeper(['images1', 'images2']) dups = file_dups(['images1', 'images2'])
dups = swp.file_dups()
print(dups) print(dups)
Remove duplicate files Remove duplicate files
.. code:: python .. code:: python
from sweeper import Sweeper from sweeper import file_dups
swp = Sweeper(['images1', 'images2']) rm_file_dups(['images'])
swp.rm()
Perform custom action Perform custom action
.. code:: python .. code:: python
from sweeper import Sweeper from sweeper import file_dups
swp = Sweeper(['images']) for files in iter_file_dups(['images']):
for f, h, dups in swp: for fname in files:
print('encountered {} which duplicates with already found duplicate files {} with hash {}'.format(f, dups, h)) print('found duplicate file with name: %s' % fname)
As script:: As script::
python -m sweeper/sweeper --help python sweeper.py --help
As installed console script::
sweeper --help
Installation Installation
============ ============
@ -63,5 +57,5 @@ https://github.com/darko-poljak/sweeper
Tested With Tested With
=========== ===========
Python2.7, Python3 Python2.7.6, Python3.3.3

0
TODO
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@ -1,17 +1,12 @@
import os import os
from setuptools import setup from setuptools import setup
def read(fname): def read(fname):
return open(os.path.join(os.path.dirname(__file__), fname)).read() return open(os.path.join(os.path.dirname(__file__), fname)).read()
import sweeper.sweeper as sw
setup( setup(
name='sweeper', name='sweeper',
version=sw.__version__, version='0.1.0',
author='Darko Poljak', author='Darko Poljak',
author_email='darko.poljak@gmail.com', author_email='darko.poljak@gmail.com',
description='Find duplicate files and perform action.', description='Find duplicate files and perform action.',
@ -20,11 +15,6 @@ setup(
url='https://github.com/darko-poljak/sweeper', url='https://github.com/darko-poljak/sweeper',
download_url='https://github.com/darko-poljak/sweeper', download_url='https://github.com/darko-poljak/sweeper',
packages=['sweeper'], packages=['sweeper'],
entry_points={
'console_scripts': [
'sweeper=sweeper.sweeper:main',
],
},
long_description=read('README.rst'), long_description=read('README.rst'),
platforms="OS Independent", platforms="OS Independent",
install_requires=["docopt"], install_requires=["docopt"],
@ -35,3 +25,4 @@ setup(
"Topic :: Software Development :: Libraries :: Python Modules", "Topic :: Software Development :: Libraries :: Python Modules",
], ],
) )

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@ -1,4 +1,4 @@
from __future__ import absolute_import from __future__ import absolute_import
from .sweeper import Sweeper from .sweeper import file_dups
__all__ = ['Sweeper'] __all__ = ['file_dups', 'mv_file_dups', 'rm_file_dups', 'iter_file_dups']

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@ -2,96 +2,52 @@
# Author: Darko Poljak <darko.poljak@gmail.com> # Author: Darko Poljak <darko.poljak@gmail.com>
# License: GPLv3 # License: GPLv3
"""{0} {1} """Sweeper.
Usage: {0} [options] [<directory>...] Usage: sweeper.py [options] [<directory>...]
Arguments: Arguments:
<directory> directory path to scan for files <directory> directory path to scan for files
Options: Options:
-h, --help show this screen -h, --help show this screen
-v, --version show version and exit -b <blocksize>, --block-size=<blocksize> size of block used when reading file's
-b <blocksize>, --block-size=<blocksize> size of block used when reading content [default: 4096]
file's content [default: 4096] -d <hashalg>, --digest-alg=<hashalg> secure hash algorithm [default: md5]
-d <hashalgs>, --digest-algs=<hashalgs> secure hash algorithm comma separated -a <action>, --action=<action> action on duplicate files
list [default: sha1] (print, remove, move) [default: print]
note that multiple hashes will slow
down sweeper
-a <action>, --action=<action> action on duplicate files (pprint,
print, remove, move)
[default: pprint]
-remove removes duplicate files
except first or first with specified
directory prefix found
-move moves duplicate files to
duplicates driectory, except first
or first with specified directory
prefix found
-print prints result directory where
keys are hash values and values are
list of duplicate file paths
-pprint prints sets of duplicate file
paths each in it's line where sets
are separated by blank newline
-m <directory>, --move=<directory> move duplicate files to directory -m <directory>, --move=<directory> move duplicate files to directory
(used with move action) (used with move action) [default: ./dups]
[default: ./dups]
-k <dirprefix>, --keep=<dirprefix> directory prefix for remove and move
actions
-s, --simulate if action is remove or move just
simulate action by printing, do not
actually perform the action
-V, --verbose print more info
note that verbosity will slow down
sweeper due to text printing and
gathering additional information
-S, --safe-mode enable safe mode: compare hash
duplicate files byte by byte too
note that it will further slow down
sweeper but will overcome hash
collisions (although this is
unlikely)
""" """
from __future__ import print_function
__author__ = 'Darko Poljak <darko.poljak@gmail.com>' __author__ = 'Darko Poljak <darko.poljak@gmail.com>'
__version__ = '0.9.0' __version__ = '0.1.0'
__license__ = 'GPLv3' __license__ = 'GPLv3'
__all__ = ['Sweeper'] __all__ = [
'file_dups', 'rm_file_dups', 'mv_file_dups', 'iter_file_dups'
]
import sys import sys
import hashlib
import os import os
from collections import defaultdict from collections import defaultdict
from functools import partial
import hashlib
# some differences in python versions # some differences in python versions
# we prefer iter methods
if sys.version_info[0] == 3: if sys.version_info[0] == 3:
def _do_encode(buf):
return buf
def _dict_iter_items(d): def _dict_iter_items(d):
return d.items() return d.items()
def _dict_iter_keys(d):
return d.keys()
def _dict_iter_values(d):
return d.values()
else: else:
def _do_encode(buf):
return buf
def _dict_iter_items(d): def _dict_iter_items(d):
return d.iteritems() return d.iteritems()
def _dict_iter_keys(d):
return d.iterkeys()
def _dict_iter_values(d):
return d.itervalues()
range = xrange
def _filehash(filepath, hashalg, block_size): def _filehash(filepath, hashalg, block_size):
"""Calculate secure hash for given file content using """Calculate secure hash for given file content using
@ -101,254 +57,56 @@ def _filehash(filepath, hashalg, block_size):
md = hashlib.new(hashalg) md = hashlib.new(hashalg)
with open(filepath, "rb") as f: with open(filepath, "rb") as f:
for buf in iter(lambda: f.read(block_size), b''): for buf in iter(lambda: f.read(block_size), b''):
md.update(buf) md.update(_do_encode(buf))
return md.hexdigest() return md.hexdigest()
def _uniq_list(list_): def file_dups(topdirs=['./'], hashalg='md5', block_size=4096):
return list(set(list_))
def _fbequal(fpath1, fpath2):
'''Compare files byte by byte. If files are equal return True,
False otherwise.
fpath1 and fpath2 are file paths.
'''
# nested to work with 2.6
with open(fpath1, "rb") as f1:
with open(fpath2, "rb") as f2:
while True:
b1 = f1.read(1)
b2 = f2.read(1)
if b1 != b2: # different bytes
return False
if not b1 or not b2: # end in one or both files
break
if not b1 and not b2: # end in both files, files are equal
return True
# end in one file but not in the other, files aren't equal
return False
def _remap_keys_to_str(d):
'''Iterator that remaps dictionary keys to string in case keys are tuple
or list. Leave it unchanged otherwise.
Yields string key, value pairs.
'''
for k in _dict_iter_keys(d):
if isinstance(k, tuple) or isinstance(k, list):
key = ','.join(k)
else:
key = k
yield (key, d[k])
def _gather_file_list(dirs):
'''Gather file paths in directory list dirs.
Return tuple (count, files) where count is files
list length and files is list of file paths in
specified directories.
'''
files = []
for dir_ in dirs:
for dirpath, dirnames, filenames in os.walk(dir_):
# replace fpath with realpath value (eliminate symbolic links)
files.extend([os.path.realpath(os.path.join(dirpath, fname))
for fname in filenames])
return files
class Sweeper(object):
DEF_HASHALGS = ['sha1']
def __init__(self, topdirs=['./'], hashalgs=DEF_HASHALGS,
block_size=4096, verbose=False, safe_mode=False):
# replace dir paths with realpath value (eliminate symbolic links)
self.topdirs = []
for i in range(len(topdirs)):
self.topdirs.append(os.path.realpath(topdirs[i]))
self.hashalgs = hashalgs
self.block_size = block_size
self.verbose = verbose
self.safe_mode = safe_mode
# iter through file paths in files list
def _files_iter_from_list(self, files):
return (fpath for fpath in files)
# iter through file paths by os.walking
def _files_iter_from_disk(self):
for topdir in self.topdirs:
for dirpath, dirnames, filenames in os.walk(topdir):
for fname in filenames:
# replace fpath with realpath value
# (eliminate symbolic links)
fpath = os.path.realpath(os.path.join(dirpath, fname))
yield fpath
def file_dups(self):
"""Find duplicate files in directory list. Return directory """Find duplicate files in directory list. Return directory
with keys equal to file hash value and value as list of with keys equal to file hash value and value as list of
file paths whose content is the same. file paths whose content is the same.
If safe_mode is true then you want to play safe: do byte
by byte comparison for hash duplicate files.
""" """
dups = defaultdict(list) dups = defaultdict(list)
if self.verbose: for topdir in topdirs:
if self.safe_mode: for dirpath, dirnames, filenames in os.walk(topdir):
print('safe mode is on') for fname in filenames:
print('gathering and counting files...', end='') fpath = os.path.join(dirpath, fname)
sys.stdout.flush() hexmd = _filehash(fpath, hashalg, block_size)
files = _gather_file_list(self.topdirs)
count = len(files)
current = 1
print(count)
_files_iter = partial(self._files_iter_from_list, files)
else:
_files_iter = self._files_iter_from_disk
for fpath in _files_iter():
if self.verbose:
print('\rprocessing file {0}/{1}: calc hash'.format(current,
count),
end='')
sys.stdout.flush()
hexmds = [_filehash(fpath, h, self.block_size)
for h in self.hashalgs]
hexmd = tuple(hexmds)
dup_files = dups[hexmd]
files_equals = False
if self.safe_mode:
if dup_files:
if self.verbose:
print('\rprocessing file {0}/{1}: byte cmp'.format(
current, count), end='')
sys.stdout.flush()
for f in dup_files:
if _fbequal(f, fpath):
files_equals = True
break
if self.verbose and not files_equals:
print('\nsame hash value {} but not same bytes for'
' file {} with files {}'.format(
hexmd, fpath, dup_files))
else: # when list is empty in safe mode
files_equals = True
else:
files_equals = True # when safe mode is off
if self.verbose:
current += 1
if files_equals:
dups[hexmd].append(fpath) dups[hexmd].append(fpath)
result = {k: v for k, v in _dict_iter_items(dups) if len(v) > 1}
if self.verbose:
print('')
# make result dict with unique file paths list
result = {}
for k, v in _dict_iter_items(dups):
uniq_v = _uniq_list(v)
if len(uniq_v) > 1:
result[k] = uniq_v
return result return result
def __iter__(self):
"""Find duplicate files in directory list.
Yield tuple of file path, hash tuple and list of duplicate files
as soon as duplicate file is found.
Newly found file is not included in the list at the yield time,
but is appended later before next yield.
This means that not all duplicate files are returned with any
return value. Same hash value and sublist could be returned later
if file with same content is found.
If safe_mode is true then you want to play safe: do byte
by byte comparison for hash duplicate files.
"""
# internaly, file dups dict is still maintained
dups = defaultdict(list)
_files_iter = self._files_iter_from_disk
for fpath in _files_iter(): def rm_file_dups(topdirs=['./'], hashalg='md5', block_size=4096):
hexmds = [_filehash(fpath, h, self.block_size)
for h in self.hashalgs]
hexmd = tuple(hexmds)
dup_files = dups[hexmd]
# there were dup list elements (used for yield)
if self.safe_mode and dup_files:
# compare only with first file in dup_files
# all files in dup_files list are already content equal
files_equals = _fbequal(dup_files[0], fpath)
else: # when list is emtpy in safe mode or when safe mode is off
files_equals = True
if files_equals:
# yield only if current dup files list isn't empty
if dup_files:
yield (fpath, hexmd, dups[hexmd])
# finally append newly found file to dup list
dups[hexmd].append(fpath)
def _extract_files_for_action(self, keep_prefix):
dups = self.file_dups()
for files in _dict_iter_values(dups):
found = False
if keep_prefix:
result = []
for f in files:
if f.startswith(keep_prefix) and not found:
found = True
else:
result.append(f)
if not found:
result = list(files)[1:]
yield (files, result)
def _do_action(self, simulate, keep_prefix, action, action_str):
for dups, extracted in self._extract_files_for_action(keep_prefix):
if simulate or self.verbose:
print('found duplicates: \n{}'.format(dups))
for f in extracted:
if simulate or self.verbose:
print(action_str.format(f))
if not simulate:
action(f)
def rm(self, simulate=False, keep_prefix=None):
"""Remove duplicate files found in specified directory list. """Remove duplicate files found in specified directory list.
If keep_prefix is specified then first file with that path First file in list is kept.
prefix found is kept in the original directory.
Otherwise first file in list is kept in the original directory.
If simulate is True then only print the action, do not actually
perform it.
If safe_mode is true then do byte by byte comparison for
hash duplicate files.
""" """
self._do_action(simulate, keep_prefix, os.remove, 'rm {}') for files in do_with_file_dups(topdirs, hashalg, block_size):
for f in files:
os.remove(f)
def mv(self, dest_dir='dups', simulate=False, keep_prefix=None):
def mv_file_dups(topdirs=['./'], hashalg='md5', block_size=4096, dest_dir='dups'):
"""Move duplicate files found in specified directory list. """Move duplicate files found in specified directory list.
If keep_prefix is specified then first file with that path First file in list is kept in the original directory.
prefix found is kept in the original directory.
Otherwise first file in list is kept in the original directory.
If simulate is True then only print the action, do not actually
perform it.
If safe_mode is true then do byte by byte comparison for
hash duplicate files.
""" """
import shutil
if not os.path.exists(dest_dir): if not os.path.exists(dest_dir):
if simulate:
print('mkdir {}'.format(dest_dir))
else:
os.mkdir(dest_dir) os.mkdir(dest_dir)
elif not os.path.isdir(dest_dir): if not os.path.isdir(dest_dir):
errmsg = '{} is not a directory'.format(dest_dir) raise OSError('%s is not a directory' % dest_dir)
if simulate: import shutil
print('would raise:', errmsg) for files in do_with_file_dups(topdirs, hashalg, block_size):
else: for i, f in enumerate(files):
raise OSError(errmsg) if i > 0:
self._do_action(simulate, keep_prefix, shutil.move(f, dest_dir)
partial(shutil.move, dst=dest_dir),
'mv {0} to ' + dest_dir)
def iter_file_dups(topdirs=['./'], hashalg='md5', block_size=4096):
"""Yield list of duplicate files when found in specified directory list.
"""
dups = file_dups(topdirs, hashalg, block_size)
for fpaths in dups.itervalues():
yield fpaths
def main(): def main():
@ -357,58 +115,32 @@ def main():
import json import json
from docopt import docopt from docopt import docopt
args = docopt(__doc__.format(sys.argv[0], __version__), args = docopt(__doc__)
version=" ".join(('sweeper', __version__)))
topdirs = args['<directory>'] topdirs = args['<directory>']
if not topdirs: if not topdirs:
topdirs = ['./'] topdirs = ['./']
action = args['--action'] action = args['--action']
verbose = args['--verbose']
# set block size as int
try: try:
bs = int(args['--block-size']) bs = int(args['--block-size'])
args['--block-size'] = bs args['--block-size'] = bs
except ValueError: except ValueError:
print('Invalid block size "{}"'.format(args['--block-size'])) print('Invalid block size "%s"' % args['--block-size'])
sys.exit(1) sys.exit(1)
hashalgs = args['--digest-algs'].split(',')
hashalgs_uniq = _uniq_list(hashalgs)
if len(hashalgs) != len(hashalgs_uniq):
print('Duplicate hash algorithms specified')
sys.exit(1)
block_size = args['--block-size']
simulate = args['--simulate']
keep_prefix = args['--keep']
dest_dir = args['--move']
safe_mode = args['--safe-mode']
sweeper = Sweeper(topdirs=topdirs, hashalgs=hashalgs, if action == 'print':
block_size=block_size, verbose=verbose, dups = file_dups(topdirs, args['--digest-alg'], args['--block-size'])
safe_mode=safe_mode) print(json.dumps(dict(dups), indent=4))
if action == 'print' or action == 'pprint':
dups = sweeper.file_dups()
# defaultdict(list) -> dict
spam = dict(dups)
if spam:
if action == 'pprint':
for _, fpaths in _dict_iter_items(spam):
for path in fpaths:
print(path)
if fpaths:
print('')
else:
print(json.dumps({k: v for k, v in _remap_keys_to_str(spam)},
indent=4))
elif action == 'move': elif action == 'move':
sweeper.mv(dest_dir, simulate, keep_prefix) mv_file_dups(topdirs, args['--digest-alg'], args['--block-size'],
args['--move'])
elif action == 'remove': elif action == 'remove':
sweeper.rm(simulate, keep_prefix) rm_file_dups(topdirs, args['--digest-alg'], args['--block-size'])
else: else:
print('Invalid action "{}"'.format(action)) print('Invalid action "%s"' % action)
# if used as script call main function
if __name__ == '__main__': if __name__ == '__main__':
main() main()

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test/__init__.pyc Normal file

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@ -3,7 +3,7 @@
# License: GPLv3 # License: GPLv3
import unittest import unittest
from sweeper import Sweeper from sweeper import file_dups
import os import os
mydir = os.path.dirname(os.path.realpath(__file__)) mydir = os.path.dirname(os.path.realpath(__file__))
@ -11,8 +11,7 @@ mydir = os.path.dirname(os.path.realpath(__file__))
class TestSweeper(unittest.TestCase): class TestSweeper(unittest.TestCase):
def test_file_dups_dups(self): def test_file_dups_dups(self):
swp = Sweeper(topdirs=[os.path.join(mydir, 'testfiles_dups')]) dups = file_dups([os.path.join(mydir, 'testfiles_dups')], 'md5')
dups = swp.file_dups()
dups_exist = False dups_exist = False
for h, flist in dups.items(): for h, flist in dups.items():
if len(flist) > 1: if len(flist) > 1:
@ -20,40 +19,10 @@ class TestSweeper(unittest.TestCase):
self.assertTrue(dups_exist) self.assertTrue(dups_exist)
def test_file_dups_nodups(self): def test_file_dups_nodups(self):
swp = Sweeper(topdirs=[os.path.join(mydir, 'testfiles_nodups')]) dups = file_dups([os.path.join(mydir, 'testfiles_nodups')], 'md5')
dups = swp.file_dups()
for h, flist in dups.items(): for h, flist in dups.items():
self.assertTrue(len(flist) == 1) self.assertTrue(len(flist) == 1)
# does not actually test safe_mode, we would need to find
# hash collision
def test_file_dups_safe_mode(self):
swp = Sweeper(topdirs=[os.path.join(mydir, 'testfiles_dups')],
safe_mode=True)
dups = swp.file_dups()
for h, flist in dups.items():
if len(flist) > 1:
dups_exist = True
self.assertTrue(dups_exist)
def test_iter_file_dups_dups(self):
swp = Sweeper(topdirs=[os.path.join(mydir, 'testfiles_dups')])
dups_exist = False
for x in swp:
dups_exist = True
filepath, h, dups = x
self.assertNotIn(filepath, dups)
self.assertTrue(len(dups) > 0)
self.assertTrue(dups_exist)
def test_iter_file_dups_nodups(self):
swp = Sweeper([os.path.join(mydir, 'testfiles_nodups')])
dups_exist = False
for x in swp:
dups_exist = True
break
self.assertFalse(dups_exist)
if __name__ == '__main__': if __name__ == '__main__':
unittest.main() unittest.main()